Browse of TCMCG075C14544 protein

CDS

Accession Number	TCMCG075C14544
gbkey	CDS
Protein Id	XP_017975472.1
Location	complement(join(29734024..29734251,29734364..29735074,29735747..29736046,29736316..29736373,29736895..29737038,29737124..29737380,29737698..29737904,29738011..29738184,29738415..29738482,29738945..29739003,29739585..29739660,29739754..29739859,29739957..29740066,29740678..29740842,29741259..29741351,29741640..29741704,29742005..29742018))
Gene	LOC18603332
GeneID	18603332
Organism	Theobroma cacao

Protein

Length	944aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA341501
db_source	XM_018119983.1
Definition	PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA mismatch repair protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000002        [VIEW IN EMBL-EBI] GO:0000217        [VIEW IN EMBL-EBI] GO:0000404        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003684        [VIEW IN EMBL-EBI] GO:0003690        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005739        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006298        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007005        [VIEW IN EMBL-EBI] GO:0008094        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009408        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009579        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0030983        [VIEW IN EMBL-EBI] GO:0032042        [VIEW IN EMBL-EBI] GO:0032135        [VIEW IN EMBL-EBI] GO:0032300        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034357        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0042651        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043570        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044436        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTTATTCAGTGTGCATTGTGGAGGAAGTTCAAGGTCCAACACAAGCTCGTTCTCGTAAAGGACGTTTTATATCTGGTATTCAGGCATGCACATCCGGGTAGTCCTTATGTATTTGGACTTGTTGGGGTTGATCATGATCTTGATTTTCCAGAACCAATGCCTGTTGTTGGTATATCTCGTTCAGCAAGGGGATATTGCATAACTCTGGTTTTAGAGACTATGAAGACATATTCTTCAGAGGATGGTCTTACTGAAGAAGCATTGGTAACCAAGCTGCGAATGTGTAGATACCATCACCTGTTTCTGCATTTATCGTTGAGAGACAATGCTTCAGGAACTTGTCGTTGGGGTGAATTTGGTGCAGGAGGCCTGTTGTGGGGAGAATGCACTACCAGACATTTTGAATGGTTTGAAGGCAATCCTGTCACTGAGCTGTTGTATAAGGTAAAGGAGCTTTATGGGCTTGATGATGAGGTTTCTTTCAGAAATGTCACTGTTCCTTCAGAAAGTAGACCCCGTCCTTTACACCTAGGAACAGCAACGCAGATTGGTGCCATCCCAACAGAAGGAATACCTTGTTTATTGAAGGTGCTGCTGCCATCAAATTGCACTGGGCTACCTGCTCTGTATATTAGAGATCTTCTTCTTAATCCTCCTGCTCATGAAATTGCATCTACAATTCAAGCAACTTGCAAACTTATGAGCAGTATCAAATGCTCAATTCCTGAGTTTACTTGTGTCGCATCTGCAAAGCTTGTGAAGCTACTTGAACTAAGGGAGGCCAACCATATTGAGTTTTGTAGAATAAAAAATGTTGTTGATGAAATACTGCACATGCATAGAAGCACGGACCTCAAAGAAATTCTGAAATTATTGATGGATCCTGCATGGGTGGCAACTGGGTTGAAGATTGACTTTGAGACACTGGTTGATGAGTGTGAATGGGTTTCAGAGAGAATTGGTCAAATGATTTTTCTGGATGGTGAAAATGATCAAAAGATAAGTTCTTATGCCAATATTCCTGGTGAATTTTTTGAGGACATGGAATCTTCATGGAAAGGTCGAGTCAAGAAGCTCCATATAGAAGAAGCAGTTGCAGAAGTTGACAGCGCAGCTGAGGCCTTATCTTTAGTGGTTACTGAAGATTTTCTCCCCATTGTCTCAAGAATAAAAGCGACCTCAGCTCCTCTTGGTGGCCCAAAGGGAGAAATATTATATGCTCGAGAGCATGAAGCTGTTTGGTTTAAGGGCAAACGGTTTGCACCAGCTGTATGGGCTGGTACTCCTGGCGAAGAACAAATTAAGCAGCTTAAGCCTGCTTTAGATTCAAAAGGTAGAAAGGTTGGAGAGGAATGGTTTACCACAATGAAGGTGGAGGACGCTTTAACGAGGTACCATGATGCTGGTGGCAAGGCAAAGGCAAGGGTTCTGGAATTGTTAAGAGGACTTTCTGCTGAGTTACAAACTAAGATAAACATCCTTGTCTTTGCTTCTATGCTGCTTGTTATCGCAAAGGCATTGTTTGCTCATGTGAGTGAGGGGAGAAGAAGGAAATGGGTTTTCCCTATACTTACAGGATTCAGTAGTTCAAAGGGTGGAGAATCATTGGATGAAACAAGAGGAATGAAGATAGTTGGTTTGACCCCATATTGGTTTGACGTGTCAGAAGGCTGTGCTGTGCTTAATACAGTTGATATGCAATCGTTATTTATTTTGACAGGACCAAATGGGGGTGGTAAATCAAGTTTGCTTCGATCAATTTGTGCAGCTGCATTACTTGGAATTTGTGGATTTATGGTTCCTGCTGAATCAGCCTTAATTCCTCAATTTGATTCAGTAATGCTTCACATGAAATCATATGATAGCCCAGCTGATGGGAAAAGTTCATTTCAGGTAGAAATGTCAGAGCTCCGATCCATCATTAGTGGAGCCAGTTCAAGGAGTCTTGTGCTTGTAGATGAAATTTGCCGAGGAACAGAAACGGTGAAAGGGACTTGCATTGCTGGTAGCATCGTTGAGACTCTTGATGAAATTGGCTGTCTAGGTATCATATCCACTCACTTGCATGGAATATTTACTTTGCCACTTCGTACCAAAAACACCATATATAAAGCAATGGGTACAGAATATGTTGATGGACAAACAAAACCAACTTGGAAGTTGGTAGATGGGATCTGCAGAGAAAGCCTTGCATTTGAAACAGCAAAGAAGGAAGGAGTTGCTGAGACAATAATACAAAGAGCTGAAGAACTTTATTCATCAGTCAATGCAAAAGAAGTATCTTCAGGAAGATTTAACACACAACTAGCACAGGTTGGTTCTGAAGGAGCCCAACTTCTATCAAATAGGACTCAAGCAGGATCTCTCTGTCATAAGAGAAAGCCAACAAACAGAATGGAAGTCTTACAGAAGGAAGTTGAGAGTGCTGTTACCTTAATTTGTCAGAAGAAGCTAATGGAGCTCTATAAGCAGAGAAACACATTGGAACTTCCAATCTTAAACTCTGTTGCTATTGCTGCTAGGGAACAGCCTCCTCCTTCAACTATAGGTGCTTCTTGCTTGTATGTCATGTTCAGACCTGATAAGAAACTATATATTGGAGAGACGGATGATCTTGATGGTCGAGTTCGTTCTCATCGTTCGAAGGAAGGAATGCAAAATGCAACCTTCCTTTATTTCATTGTTCCAGGGAAGAGTATCGCTCGCCAACTAGAAACTCTCCTGATCAACCAACTCTCAAGTCAAGGCTTCCCACTCACCAATCTGGCCGATGGTAAGCATCAGAATTTTGGCACATCCAGTCTCTCAGTAGGCAGCATAACTGTTGCCTAA

Protein:   MVIQCALWRKFKVQHKLVLVKDVLYLVFRHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCITLVLETMKTYSSEDGLTEEALVTKLRMCRYHHLFLHLSLRDNASGTCRWGEFGAGGLLWGECTTRHFEWFEGNPVTELLYKVKELYGLDDEVSFRNVTVPSESRPRPLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPALYIRDLLLNPPAHEIASTIQATCKLMSSIKCSIPEFTCVASAKLVKLLELREANHIEFCRIKNVVDEILHMHRSTDLKEILKLLMDPAWVATGLKIDFETLVDECEWVSERIGQMIFLDGENDQKISSYANIPGEFFEDMESSWKGRVKKLHIEEAVAEVDSAAEALSLVVTEDFLPIVSRIKATSAPLGGPKGEILYAREHEAVWFKGKRFAPAVWAGTPGEEQIKQLKPALDSKGRKVGEEWFTTMKVEDALTRYHDAGGKAKARVLELLRGLSAELQTKINILVFASMLLVIAKALFAHVSEGRRRKWVFPILTGFSSSKGGESLDETRGMKIVGLTPYWFDVSEGCAVLNTVDMQSLFILTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPQFDSVMLHMKSYDSPADGKSSFQVEMSELRSIISGASSRSLVLVDEICRGTETVKGTCIAGSIVETLDEIGCLGIISTHLHGIFTLPLRTKNTIYKAMGTEYVDGQTKPTWKLVDGICRESLAFETAKKEGVAETIIQRAEELYSSVNAKEVSSGRFNTQLAQVGSEGAQLLSNRTQAGSLCHKRKPTNRMEVLQKEVESAVTLICQKKLMELYKQRNTLELPILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATFLYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLSVGSITVA